Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Nucleobase, Nucleoside, Nucleotide And Nucleic Acid Metabolic Process (GO:0006139) Genes Targeted by hsa-mir-223 in AC Brain Sun Cluster 34 Table contains all genes in the AC Brain Sun cluster number 34. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-223 GO:0006139 7570 ZNF22 zinc finger protein 22 (KOX 15) [Source:HGNC Symbol;Acc:13012] zzz999 Yes 91151 TIGD7 tigger transposable element derived 7 [Source:HGNC Symbol;Acc:18331] T Yes 55670 PEX26 peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:22965] zzz999 54482 CCDC76 coiled-coil domain containing 76 [Source:HGNC Symbol;Acc:25502] zzz999 Yes 84441 MAML2 mastermind-like 2 (Drosophila) [Source:HGNC Symbol;Acc:16259] zzz999 Yes 387758 FIBIN fin bud initiation factor homolog (zebrafish) [Source:HGNC Symbol;Acc:33747] zzz999 164395 TTLL9 tubulin tyrosine ligase-like family, member 9 [Source:HGNC Symbol;Acc:16118] zzz999 7429 VIL1 villin 1 [Source:HGNC Symbol;Acc:12690] zzz999 79989 TTC26 tetratricopeptide repeat domain 26 [Source:HGNC Symbol;Acc:21882] zzz999 58516 FAM60A family with sequence similarity 60, member A [Source:HGNC Symbol;Acc:30702] P T 91442 C19orf40 chromosome 19 open reading frame 40 [Source:HGNC Symbol;Acc:28467] zzz999 Yes 79736 C17orf42 chromosome 17 open reading frame 42 [Source:HGNC Symbol;Acc:26223] zzz999 84924 ZNF566 zinc finger protein 566 [Source:HGNC Symbol;Acc:25919] zzz999 Yes 25909 AHCTF1 AT hook containing transcription factor 1 [Source:HGNC Symbol;Acc:24618] zzz999 Yes 10081 PDCD7 programmed cell death 7 [Source:HGNC Symbol;Acc:8767] zzz999 Yes 24147 FJX1 four jointed box 1 (Drosophila) [Source:HGNC Symbol;Acc:17166] zzz999 10329 TMEM5 transmembrane protein 5 [Source:HGNC Symbol;Acc:13530] zzz999 3099 HK2 hexokinase 2 [Source:HGNC Symbol;Acc:4923] zzz999 55608 ANKRD10 ankyrin repeat domain 10 [Source:HGNC Symbol;Acc:20265] T 57786 RBAK RB-associated KRAB zinc finger [Source:HGNC Symbol;Acc:17680] T Yes 57560 IFT80 intraflagellar transport 80 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:29262] zzz999 79829 NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25845] zzz999 23516 SLC39A14 solute carrier family 39 (zinc transporter), member 14 [Source:HGNC Symbol;Acc:20858] T 56180 MOSPD1 motile sperm domain containing 1 [Source:HGNC Symbol;Acc:25235] T Yes 23389 MED13L mediator complex subunit 13-like [Source:HGNC Symbol;Acc:22962] zzz999 Yes 158431 ZNF782 zinc finger protein 782 [Source:HGNC Symbol;Acc:33110] zzz999 Yes 9037 SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:HGNC Symbol;Acc:10736] T 285955 SPDYE1 speedy homolog E1 (Xenopus laevis) [Source:HGNC Symbol;Acc:16408] zzz999 6599 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 [Source:HGNC Symbol;Acc:11104] zzz999 Yes 10157 AASS aminoadipate-semialdehyde synthase [Source:HGNC Symbol;Acc:17366] zzz999 4781 NFIB nuclear factor I/B [Source:HGNC Symbol;Acc:7785] P T Yes 163081 ZNF567 zinc finger protein 567 [Source:HGNC Symbol;Acc:28696] zzz999 Yes 29889 GNL2 guanine nucleotide binding protein-like 2 (nucleolar) [Source:HGNC Symbol;Acc:29925] zzz999 79943 ZNF696 zinc finger protein 696 [Source:HGNC Symbol;Acc:25872] zzz999 Yes 4440 MSI1 musashi homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:7330] zzz999 23043 TNIK TRAF2 and NCK interacting kinase [Source:HGNC Symbol;Acc:30765] zzz999 51244 C3orf19 chromosome 3 open reading frame 19 [Source:HGNC Symbol;Acc:28033] zzz999 347733 TUBB2B tubulin, beta 2B [Source:HGNC Symbol;Acc:30829] zzz999 57684 ZBTB26 zinc finger and BTB domain containing 26 [Source:HGNC Symbol;Acc:23383] T Yes 23272 C3orf63 chromosome 3 open reading frame 63 [Source:HGNC Symbol;Acc:30314] zzz999 83549 UCK1 uridine-cytidine kinase 1 [Source:HGNC Symbol;Acc:14859] T Yes 11157 LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17017] T Yes 91522 COL23A1 collagen, type XXIII, alpha 1 [Source:HGNC Symbol;Acc:22990] zzz999 27340 UTP20 UTP20, small subunit (SSU) processome component, homolog (yeast) [Source:HGNC Symbol;Acc:17897] zzz999 Yes 124790 HEXIM2 hexamthylene bis-acetamide inducible 2 [Source:HGNC Symbol;Acc:28591] zzz999 Yes 112869 CCDC101 coiled-coil domain containing 101 [Source:HGNC Symbol;Acc:25156] zzz999 Yes 54811 ZNF562 zinc finger protein 562 [Source:HGNC Symbol;Acc:25950] zzz999 Yes 7175 TPR translocated promoter region (to activated MET oncogene) [Source:HGNC Symbol;Acc:12017] zzz999 Yes 152815 THAP6 THAP domain containing 6 [Source:HGNC Symbol;Acc:23189] zzz999 26063 DECR2 2,4-dienoyl CoA reductase 2, peroxisomal [Source:HGNC Symbol;Acc:2754] zzz999 85440 DOCK7 dedicator of cytokinesis 7 [Source:HGNC Symbol;Acc:19190] zzz999 Yes 79915 ATAD5 ATPase family, AAA domain containing 5 [Source:HGNC Symbol;Acc:25752] zzz999 11252 PACSIN2 protein kinase C and casein kinase substrate in neurons 2 [Source:HGNC Symbol;Acc:8571] zzz999 7594 ZNF43 zinc finger protein 43 [Source:HGNC Symbol;Acc:13109] zzz999 Yes 90233 ZNF551 zinc finger protein 551 [Source:HGNC Symbol;Acc:25108] zzz999 Yes 7157 TP53 tumor protein p53 [Source:HGNC Symbol;Acc:11998] T Yes 10201 NME6 non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase) [Source:HGNC Symbol;Acc:20567] zzz999 Yes 84436 ZNF528 zinc finger protein 528 [Source:HGNC Symbol;Acc:29384] T Yes 57630 SH3RF1 SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:17650] T 23404 EXOSC2 exosome component 2 [Source:HGNC Symbol;Acc:17097] zzz999 Yes 10379 IRF9 interferon regulatory factor 9 [Source:HGNC Symbol;Acc:6131] zzz999 Yes 92126 DSEL dermatan sulfate epimerase-like [Source:HGNC Symbol;Acc:18144] T 2958 GTF2A2 general transcription factor IIA, 2, 12kDa [Source:HGNC Symbol;Acc:4647] zzz999 Yes 51241 COX16 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20213] zzz999 5498 PPOX protoporphyrinogen oxidase [Source:HGNC Symbol;Acc:9280] zzz999 51293 CD320 CD320 molecule [Source:HGNC Symbol;Acc:16692] zzz999 54815 GATAD2A GATA zinc finger domain containing 2A [Source:HGNC Symbol;Acc:29989] T Yes 57506 MAVS mitochondrial antiviral signaling protein [Source:HGNC Symbol;Acc:29233] zzz999 22880 MORC2 MORC family CW-type zinc finger 2 [Source:HGNC Symbol;Acc:23573] zzz999 80014 WWC2 WW and C2 domain containing 2 [Source:HGNC Symbol;Acc:24148] T 54346 UNC93A unc-93 homolog A (C. elegans) [Source:HGNC Symbol;Acc:12570] zzz999 9921 RNF10 ring finger protein 10 [Source:HGNC Symbol;Acc:10055] zzz999 Yes 55705 IPO9 importin 9 [Source:HGNC Symbol;Acc:19425] T 10478 SLC25A17 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 [Source:HGNC Symbol;Acc:10987] zzz999 1104 RCC1 regulator of chromosome condensation 1 [Source:HGNC Symbol;Acc:1913] zzz999 163033 ZNF579 zinc finger protein 579 [Source:HGNC Symbol;Acc:26646] zzz999 Yes 23452 ANGPTL2 angiopoietin-like 2 [Source:HGNC Symbol;Acc:490] zzz999 252983 STXBP4 syntaxin binding protein 4 [Source:HGNC Symbol;Acc:19694] T 400720 ZNF772 zinc finger protein 772 [Source:HGNC Symbol;Acc:33106] T Yes 1266 CNN3 calponin 3, acidic [Source:HGNC Symbol;Acc:2157] zzz999 10606 PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:HGNC Symbol;Acc:8587] zzz999 Yes 29843 SENP1 SUMO1/sentrin specific peptidase 1 [Source:HGNC Symbol;Acc:17927] zzz999 570 BAAT bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase) [Source:HGNC Symbol;Acc:932] zzz999 10763 NES nestin [Source:HGNC Symbol;Acc:7756] zzz999 5456 POU3F4 POU class 3 homeobox 4 [Source:HGNC Symbol;Acc:9217] zzz999 Yes 56124 PCDHB12 protocadherin beta 12 [Source:HGNC Symbol;Acc:8683] zzz999 147929 ZNF565 zinc finger protein 565 [Source:HGNC Symbol;Acc:26726] zzz999 Yes 7407 VARS valyl-tRNA synthetase [Source:HGNC Symbol;Acc:12651] zzz999 Yes 9563 H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:HGNC Symbol;Acc:4795] zzz999 Yes 55677 IWS1 IWS1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25467] zzz999 Yes 80185 C8orf41 chromosome 8 open reading frame 41 [Source:HGNC Symbol;Acc:26262] zzz999 11097 NUPL2 nucleoporin like 2 [Source:HGNC Symbol;Acc:17010] zzz999 79796 ALG9 asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:15672] zzz999 90293 KLHL13 kelch-like 13 (Drosophila) [Source:HGNC Symbol;Acc:22931] zzz999 146540 ZNF785 zinc finger protein 785 [Source:HGNC Symbol;Acc:26496] zzz999 Yes 81611 ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:HGNC Symbol;Acc:16673] T 23380 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 [Source:HGNC Symbol;Acc:19751] zzz999 79711 IPO4 importin 4 [Source:HGNC Symbol;Acc:19426] zzz999 9401 zzz999 zzz999 zzz999 Yes 113174 SAAL1 serum amyloid A-like 1 [Source:HGNC Symbol;Acc:25158] zzz999 6294 SAFB scaffold attachment factor B [Source:HGNC Symbol;Acc:10520] zzz999 Yes 3187 HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) [Source:HGNC Symbol;Acc:5041] zzz999 Yes 10746 MAP3K2 mitogen-activated protein kinase kinase kinase 2 [Source:HGNC Symbol;Acc:6854] T 8277 TKTL1 transketolase-like 1 [Source:HGNC Symbol;Acc:11835] zzz999 26020 LRP10 low density lipoprotein receptor-related protein 10 [Source:HGNC Symbol;Acc:14553] zzz999 23368 PPP1R13B protein phosphatase 1, regulatory (inhibitor) subunit 13B [Source:HGNC Symbol;Acc:14950] zzz999 51520 LARS leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:6512] zzz999 Yes 84142 FAM175A family with sequence similarity 175, member A [Source:HGNC Symbol;Acc:25829] zzz999 Yes 403 ARL3 ADP-ribosylation factor-like 3 [Source:HGNC Symbol;Acc:694] zzz999 348327 ZNF530 zinc finger protein 530 [Source:HGNC Symbol;Acc:29297] zzz999 Yes 7918 GPANK1 G patch domain and ankyrin repeats 1 [Source:HGNC Symbol;Acc:13920] zzz999 11266 DUSP12 dual specificity phosphatase 12 [Source:HGNC Symbol;Acc:3067] zzz999 285671 RNF180 ring finger protein 180 [Source:HGNC Symbol;Acc:27752] T 9126 SMC3 structural maintenance of chromosomes 3 [Source:HGNC Symbol;Acc:2468] zzz999 Yes 56949 XAB2 XPA binding protein 2 [Source:HGNC Symbol;Acc:14089] zzz999 Yes 55616 ASAP3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:HGNC Symbol;Acc:14987] zzz999 Yes 134728 IRAK1BP1 interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:HGNC Symbol;Acc:17368] T Yes 192286 HIGD2A HIG1 hypoxia inducible domain family, member 2A [Source:HGNC Symbol;Acc:28311] zzz999 348793 WDR53 WD repeat domain 53 [Source:HGNC Symbol;Acc:28786] zzz999 5425 POLD2 polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Source:HGNC Symbol;Acc:9176] zzz999 Yes 1605 DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) [Source:HGNC Symbol;Acc:2666] P T 493911 PHOSPHO2 phosphatase, orphan 2 [Source:HGNC Symbol;Acc:28316] zzz999 8536 CAMK1 calcium/calmodulin-dependent protein kinase I [Source:HGNC Symbol;Acc:1459] zzz999 25850 ZNF345 zinc finger protein 345 [Source:HGNC Symbol;Acc:16367] zzz999 Yes 23325 KIAA1033 KIAA1033 [Source:HGNC Symbol;Acc:29174] zzz999 9786 KIAA0586 KIAA0586 [Source:HGNC Symbol;Acc:19960] zzz999 140890 SREK1 splicing regulatory glutamine/lysine-rich protein 1 [Source:HGNC Symbol;Acc:17882] P T Yes 81034 SLC25A32 solute carrier family 25, member 32 [Source:HGNC Symbol;Acc:29683] T 81493 SYNC syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:28897] zzz999 5096 PCCB propionyl CoA carboxylase, beta polypeptide [Source:HGNC Symbol;Acc:8654] zzz999 3837 KPNB1 karyopherin (importin) beta 1 [Source:HGNC Symbol;Acc:6400] zzz999 Yes 10181 RBM5 RNA binding motif protein 5 [Source:HGNC Symbol;Acc:9902] zzz999 Yes 162967 ZNF320 zinc finger protein 320 [Source:HGNC Symbol;Acc:13842] zzz999 Yes 84966 IGSF21 immunoglobin superfamily, member 21 [Source:HGNC Symbol;Acc:28246] T 143884 CWF19L2 CWF19-like 2, cell cycle control (S. pombe) [Source:HGNC Symbol;Acc:26508] T 9189 ZBED1 zinc finger, BED-type containing 1 [Source:HGNC Symbol;Acc:447] zzz999 159091 FAM122C family with sequence similarity 122C [Source:HGNC Symbol;Acc:25202] zzz999 23683 PRKD3 protein kinase D3 [Source:HGNC Symbol;Acc:9408] T 80222 TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative) [Source:HGNC Symbol;Acc:30740] zzz999 Yes 79800 ALS2CR8 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8 [Source:HGNC Symbol;Acc:14435] zzz999 Yes 54881 TEX10 testis expressed 10 [Source:HGNC Symbol;Acc:25988] zzz999 79990 PLEKHH3 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 [Source:HGNC Symbol;Acc:26105] zzz999 8819 SAP30 Sin3A-associated protein, 30kDa [Source:HGNC Symbol;Acc:10532] zzz999 Yes 1106 CHD2 chromodomain helicase DNA binding protein 2 [Source:HGNC Symbol;Acc:1917] T Yes 3385 ICAM3 intercellular adhesion molecule 3 [Source:HGNC Symbol;Acc:5346] zzz999 10840 ALDH1L1 aldehyde dehydrogenase 1 family, member L1 [Source:HGNC Symbol;Acc:3978] zzz999 147657 ZNF480 zinc finger protein 480 [Source:HGNC Symbol;Acc:23305] T Yes

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